Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015955347.1_cds_XP_016493875.1_83932
CDS Infomation

[gene=LOC107813165] [db_xref=GeneID:107813165] [protein=heparanase-like protein 3] [protein_id=XP_016493875.1] [location=join(104480..104707,105611..105647,105877..106060,106147..106295,106705..106935,107027..107216,107314..107439,107784..107883,107968..108339)] [gbkey=CDS]
Sequence

ATGGGTTCTTTATTTTTGCAAAAGGGAGTGTTGGTGTGGATTTGTTTGTTTAGTTTGAGA
TTGATTTGTGGGTACTCAGAGGTTGCTCAAGGCAGTGTGTTTATAGATGGGAAGAATGCC
ATTGGAAGAATAGACAATAATTTCATTTGTGCTACTTTGGATTGGTGGCCACCTGAGAAA
TGTGATTATGGAACTTGTGCTTGGGACCATGCTTCTTTCCTTAATCTGGATCTTAACAAC
ATTATTTTTCTCAAAGCAATAAAAGCCTTCTCGCCGTTAAAGATTCGGTTAGGAGGCACC
TTGCAAGACAAAGTCATATACCAAACTGAAGATCATAAACAGCCCTGTGTTTCATTTGTT
CAAAACACTTCAGAGATGTTTGGTTTTACTCCAGGATGTCTTCCCTTGTCTAGATGGGAT
GAACTCAATGCATTCTTTAATAAATCTGGGGCTAGTATAATTTTTGGATTGAATGCTCTC
TACGGAAGATCTGTACACCCCGATGGTTTATCCGTGGGAGCTTGGGATTCAAGCAATGCT
GAATCGCTTATACGTTATACTGTCAAAAAGGGATACGTTATCCACGGTTGGGAGCTTGGG
AATGAATTGTGTGGGAGTGGAGTTGGAACCAGAGTTGCAGCAGATCAATATGCATCTGAT
ACTACTGCCTTGTACAAAATAGTACAAGATGCTTACAAGAATTTTGAACCTAGGCCTCTG
GTCATTGCACCAGGAGGTTTCTTCGACGAAGGCTGGTTTAGGGAATTAATAAATAAAACT
GGGAAATCATTTGATGTGGCCACTCACCACATATATAACCTTGGTCCAGGAAGAGATGAA
CACCTTGTTGATAAAATCCTCGATCCATCTTATCTCGATGGTGAGGCCGACACATTTAGC
AAACTTCAGAATGTACTCAAGACCTCTGGTACTTCAGTGGTTGCTTGGGTTGGTGAGGCT
GGAGGGGCTTACAACAGCGGTCGCAACCATGTCACAAATGCCTTTGTTTTTAGCTTCTGG
TATTTGGACCAGCTTGGGATGTCAGCTGCTTATGATACCAAGACATACTGTCGACAGACA
CTAATTGGTGGAAACTATGGTTTACTCAACACCACTACCTTTGTACCCAATCCAGATTAC
TACAGTGCTCTTCTTTGGCACCGATTAATGGGAAGGAACGTCTTGTCAACAAGTTTCTCA
GGATCAAAGAAAATACGTGCCTACACACATTGTGCAAAGCAATCTCAAGGCATCACCTTA
TTGTTGATCAATCTTGACGGCAACACTACCATTCGCGCAAACATTGCTTTTAACGGTACT
CTGTTGCACCACAGAAAGCACAGACATCATAGCCACAGAAAGAGTTCTTCAATTAGACTG
CCTAAAAGTAGAAAGATAGCATCAAATACAAGACAAGAATACCATTTAACAGCAAAAGAT
GGAGATTTGCAAAGCCAGACAATGCTGCTAAATGGGAAACCACTAACTATAGATTCATTT
GGAAATATACCATCATTGGAGCCTATATTTGTCAATTCAACAGAGCCATTAACAGTAGCT
CCATTCTCTATTTTGTTTGTACACATACCATATGTTATTTTGCCTGCTTGTAGCTGA

Peptide Sequence

PEP ID

XP_016493875.1
PEP Infomation

PREDICTED: heparanase-like protein 3 [Nicotiana tabacum]
Sequence

MGSLFLQKGVLVWICLFSLRLICGYSEVAQGSVFIDGKNAIGRIDNNFICATLDWWPPEK
CDYGTCAWDHASFLNLDLNNIIFLKAIKAFSPLKIRLGGTLQDKVIYQTEDHKQPCVSFV
QNTSEMFGFTPGCLPLSRWDELNAFFNKSGASIIFGLNALYGRSVHPDGLSVGAWDSSNA
ESLIRYTVKKGYVIHGWELGNELCGSGVGTRVAADQYASDTTALYKIVQDAYKNFEPRPL
VIAPGGFFDEGWFRELINKTGKSFDVATHHIYNLGPGRDEHLVDKILDPSYLDGEADTFS
KLQNVLKTSGTSVVAWVGEAGGAYNSGRNHVTNAFVFSFWYLDQLGMSAAYDTKTYCRQT
LIGGNYGLLNTTTFVPNPDYYSALLWHRLMGRNVLSTSFSGSKKIRAYTHCAKQSQGITL
LLINLDGNTTIRANIAFNGTLLHHRKHRHHSHRKSSSIRLPKSRKIASNTRQEYHLTAKD
GDLQSQTMLLNGKPLTIDSFGNIPSLEPIFVNSTEPLTVAPFSILFVHIPYVILPACS

Transcript Sequence

Gene sequence data has not been registered.